Publications of January Weiner

Beigier-Bompadre, M.; Montagna, G. N.; Kühl, A. A.; Lozza, L.; Weiner, J.; Kupz, A.; Vogelzang, A.; Mollenkopf, H.-J.; Löwe, D.; Bandermann, S. et al.; Dorhoi, A.; Brinkmann, V.; Matuschewski, K.; Kaufmann, S. H. E.: Mycobacterium tuberculosis infection modulates adipose tissue biology. PLoS Pathogens 13 (10), e1006676 (2017)

Domaszewska, T.; Scheuermann, L.; Hahnke, K.; Mollenkopf, H.; Dorhoi, A.; Kaufmann, S. H. E.; Weiner, J. 3.: Concordant and discordant gene expression patterns in mouse strains identify best-fit animal model for human tuberculosis. Scientific Reports 7 (1), 12094 (2017)

Kaufmann, S. H. E.; Weiner, J. 3.; Maertzdorf, J.: Accelerating tuberculosis vaccine trials with diagnostic and prognostic biomarkers. Expert Review of Vaccines 16 (8), pp. 845 - 853 (2017)

Zyla, J.; Marczyk, M.; Weiner, J.; Polanska, J.: Ranking metrics in gene set enrichment analysis: do they matter? BMC Bioinformatics 18 (1), 256 (2017)

Kaufmann, S. H. E.; Weiner, J.; von Reyn, C. F.: Novel approaches to tuberculosis vaccine development. International journal of infectious diseases 56, pp. 263 - 267 (2017)

Weiner, J.; Kaufmann, S. H. E.: High-throughput and computational approaches for diagnostic and prognostic host tuberculosis biomarkers. International journal of infectious diseases 56, pp. 258 - 262 (2017)

Streata, I.; Weiner, J. 3.; Iannaccone, M.; McEwen, G.; Ciontea, M. S.; Olaru, M.; Capparelli, R.; Ioana, M.; Kaufmann, S. H. E.; Dorhoi, A.: Correction: The CARD9 Polymorphisms rs4077515, rs10870077 and rs10781499 Are Uncoupled from Susceptibility to and Severity of Pulmonary Tuberculosis. PLoS One 11 (10), e0165853 (2016)

Streata, I.; Weiner, J. 3.; Iannaconne, M.; McEwen, G.; Ciontea, M. S.; Olaru, M.; Capparelli, R.; Ioana, M.; Kaufmann, S. H. E.; Dorhoi, A.: The CARD9 Polymorphisms rs4077515, rs10870077 and rs10781499 Are Uncoupled from Susceptibility to and Severity of Pulmonary Tuberculosis. PLoS One 11 (9), e0163662 (2016)

Weiner, J. 3.; Domaszewska, T.: tmod: an R package for general and multivariate enrichment analysis. PeerJ Preprints 4, e2420v1 (2016)

Weiner, J. 3.; Kooij, T. W.A.: Phylogenetic profiles of all membrane transport proteins of the malaria parasite highlight new drug targets. Microbial Cell 3 (10), pp. 511 - 521 (2016)

Maertzdorf, J.; McEwen, G.; Weiner, J. 3.; Tian, S.; Lader, E.; Schriek, U.; Mayanja‐Kizza, H.; Ota, M.; Kenneth, J.; Kaufmann, S. H. E.: Concise gene signature for point‐of‐care classification of tuberculosis. EMBO Molecular medicine 8 (2), pp. 86 - 95 (2016)

Maertzdorf, J.; Kaufmann, S. H. E.; Weiner, J. 3.: Molecular signatures for vaccine development. Vaccine 33 (40), pp. 5256 - 5261 (2015)

Weiner, J. 3.; Kaufmann, S. H. E.; Maertzdorf, J.: High-throughput data analysis and data integration for vaccine trials. Vaccine 33 (40), pp. 5249 - 5255 (2015)

Esterhuyse, M. M.; Weiner, J. 3.; Caron, E.; Loxton, A. G.; Iannaccone, M.; Wagman, C.; Saikali, P.; Stanley, K.; Wolski, W. E.; Mollenkopf, H.-J. et al.; Schick, M.; Aebersold, R.; Linhart, H.; Walzl, G.; Kaufmann, S. H. E.: Epigenetics and Proteomics Join Transcriptomics in the Quest for Tuberculosis Biomarkers. mBio 6 (5), e01187-15 (2015)

Tientcheu, L. D.; Maertzdorf, J.; Weiner, J.; Adetifa, I. M.; Mollenkopf, H.-J.; Sutherland, J. S.; Donkor, S.; Kampmann, B.; Kaufmann, S. H. E.; Dockrell, H. M. et al.; Ota, M. O.: Differential transcriptomic and metabolic profiles of M. africanum- and M. tuberculosis-infected patients after, but not before, drug treatment. Genes and Immunity 16 (5), pp. 347 - 355 (2015)

Maertzdorf, J.; Kaufmann, S. H. E.; Weiner, J. 3.: Toward a Unified Biosignature for Tuberculosis. Cold Spring Harbor Perspectives in Medicine 5 (1), a018532 (2015)

Duque-Correa, M. A.; Kühl, A. A.; Rodriguez, P. C.; Zedler, U.; Schommer-Leitner, S.; Rao, M.; Weiner, J. 3.; Hurwitz, R.; Qualls, J. E.; Kosmiadi, G. A. et al.; Murray, P. J.; Kaufmann, S. H. E.; Reece, S. T.: Macrophage arginase-1 controls bacterial growth and pathology in hypoxic tuberculosis granulomas. Proceedings of the National Academy of Sciences of the United States of America 111 (38), pp. E4024 - E4032 (2014)

Dorhoi, A.; Yeremeev, V.; Nouailles, G.; Weiner, J. 3.; Jörg, S.; Heinemann, E.; Oberbeck-Müller, D.; Knaul, J. K.; Vogelzang, A.; Reece, S. T. et al.; Hahnke, K.; Mollenkopf, H.-J.; Brinkmann, V.; Kaufmann, S. H. E.: Type I IFN signaling triggers immunopathology in tuberculosis-susceptible mice by modulating lung phagocyte dynamics. European Journal of Immunology 44 (8), pp. 2380 - 2393 (2014)

Weiner, J. 3.; Kaufmann, S. H. E.: Recent advances towards tuberculosis control: vaccines and biomarkers. Annals of Internal Medicine 275 (5), pp. 467 - 480 (2014)

Nouailles, G.; Dorhoi, A.; Koch, M.; Zerrahn, J.; Weiner, J. 3.; Faé, K. C.; Arrey, F.; Kuhlmann, S.; Bandermann, S.; Loewe, D. et al.; Mollenkopf, H.-J.; Vogelzang, A.; Meyer-Schwesinger, C.; Mittrücker, H.-W.; McEwen, G.; Kaufmann, S. H. E.: CXCL5-secreting pulmonary epithelial cells drive destructive neutrophilic inflammation in tuberculosis. The Journal of Clinical Investigation 124 (3), pp. 1268 - 1282 (2014)