Publications

Musvosvi, M.; Huang, H.; Wang, C.; Xia, Q.; Rozot, V.; Krishnan, A.; Acs, P.; Cheruku, A.; Obermoser, G.; Leslie, A. et al.; Behar, S. M.; Hanekom, W. A.; Bilek, N.; Fisher, M.; Kaufmann, S. H. E.; Walzl, G.; Hatherill, M.; Davis, M. M.; Scriba, T. J.; Adolescent Cohort Studyteam; CG-74 Consortium: T cell receptor repertoires associated with control and disease progression following Mycobacterium tuberculosis infection. Nature Medicine (2023)

Fritsche, K.; Boccellato, F.; Schlaermann, P.; Koeppel, M.; Denecke, C.; Link, A.; Malfertheiner, P.; Gut, I.; Meyer, T. F.; Berger, H.: DNA methylation in human gastric epithelial cells defines regional identity without restricting lineage plasticity. Clin Epigenetics 14 (1), 193 (2022)

Eletto, D.; Mentucci, F.; Vllahu, M.; Voli, A.; Petrella, A.; Boccellato, F.; Meyer, T. F.; Porta, A.; Tosco, A.: IFN gamma-dependent silencing of TFF1 during Helicobacter pylori infection. Open Biology 12, 220278 (2022)

Meier, S.; Seddon, J. A.; Maasdorp, E.; Kleynhans, L.; du Plessis, N.; Loxton, A. G.; Malherbe, S. T.; Zak, D. E.; Thompson, E.; Duffy, F. J. et al.; Kaufmann, S. H. E.; Ottenhoff, T. H. M.; Scriba, T. J.; Suliman, S.; Sutherland, J. S.; Winter, J.; Kuivaniemi, H.; Walzl, G.; Tromp, G.; GC-Consortium; Catalysis TB BiomarkersConsortium: Neutrophil degranulation, NETosis and platelet degranulation pathway genes are co-induced in whole blood up to six months before tuberculosis diagnosis. PLoS One 17 (12), e0278295 (2022)

Kucharska, I.; Binter, S.; Murugan, R.; Scally, S. W.; Ludwig, J.; Prieto, K.; Thai, E.; Costa, G.; Li, K.; Horn, G. Q. et al.; Garcia, Y. F.-; Bosch, A.; Sicard, T.; Rubinstein, J. L.; Zavala, F.; Dennison, S. M.; Tomaras, G. D.; Levashina, E.; Kellam, P.; Wardemann, H.; Julien, J.-P.: High-density binding to Plasmodium falciparum circumsporozoite protein repeats by inhibitory antibody elicited in mouse with human immunoglobulin repertoire. PLoS Pathogens 18 (11), e1010999 (2022)

Blossey, A. M.; Brückner, S.; May, M.; Parzmair, G. P.; Sharma, H.; Shaligram, U.; Grode, L.; Kaufmann, S. H. E.; Netea, M. G.; Schindler, C.: VPM1002 as Prophylaxis Against Severe Respiratory Tract Infections Including COVID-19 in the Elderly: a phase III randomised, double-blind, placebo-controlled, multicenter clinical study. Clinical Infectious Diseases, ciac881 (2022)

Nenko, I.; Briga, M.; Micek, A.; Jasienska, G.: From January to June: Birth seasonality across two centuries in a rural Polish community. Scientific Reports 12 (1), 18579 (2022)

Fischer, A.-S.; Müllerke, S.; Arnold, A.; Heuberger, J.; Berger, H.; Lin, M.; Mollenkopf, H.-J.; Wizenty, J.; Horst, D.; Tacke, F. et al.; Sigal, M.: R-spondin/YAP axis promotes gastric oxyntic gland regeneration and Helicobacter pylori-associated metaplasia in mice. The Journal of Clinical Investigation 132 (21), e151363 (2022)

Tan, C. W.; Chia, W. N.; Zhu, F.; Young, B. E.; Chantasrisawad, N.; Hwa, S.-H.; Yeoh, A. Y.-Y.; Lim, B. L.; Yap, W. C.; Pada, S. K. M. S. et al.; Tan, S. Y.; Jantarabenjakul, W.; Toh, L. K.; Chen, S.; Zhang, J.; Mah, Y. Y.; Chen, V. C.-W.; Chen, M. I.-C.; Wacharapluesadee, S.; Sigal, A.; Putcharoen, O.; Lye, D. C.; Wang, L.-F.: SARS-CoV-2 Omicron variant emerged under immune selection. Nature Microbiology 7 (11), pp. 1756 - 1761 (2022)

Krause, R.; Snyman, J.; Shi-Hsia, H.; Muema, D.; Karim, F.; Ganga, Y.; Ngoepe, A.; Zungu, Y.; Gazy, I.; Bernstein, M. et al.; Khan, K.; Mazibuko, M.; Mthabela, N.; Ramjit, D.; COMMIT-KZN Team; Limbo, O.; Jardine, J.; Sok, D.; Wilson, I. A.; Hanekom, W.; Sigal, A.; Kløverpris, H.; Ndung'u, T.; Leslie, A.: HIV skews the SARS-CoV-2 B cell response towards an extrafollicular maturation pathway. eLife, e79924 (2022)

Tilley, D. O.; Abuabed, U.; Zimny-Arndt, U.; Schmid, M.; Florian, S.; Jungblut, P. R.; Brinkmann, V.; Herzig, A.; Zychlinsky, A.: Histone H3 clipping is a novel signature of human neutrophil extracellular traps. eLife 11, e68283 (2022)

Gurumurthy, R. K.; Pleissner, K.-P.; Chumduri, C.; Meyer, T. F.; Mäurer, A. P.: Single object profiles regression analysis (SOPRA): a novel method for analyzing high-content cell-based screens. BMC Bioinformatics 23 (1), 440 (2022)

Tagliabue, A.; Boraschi, D.; Leite, L. C. C.; Kaufmann, S. H. E.: 100 Years of BCG Immunization: Past, Present, and Future. Vaccine 10, 1743, p. 10 (2022)

Romero, R.; Zarzycka, A.; Preussner, M.; Fischer, F.; Hain, T.; Herrmann, J.-P.; Roth, K.; Keber, C. U.; Suryamohan, K.; Raifer, H. et al.; Luu, M.; Leister, H.; Bertrams, W.; Klein, M.; Shams-Eldin, H.; Jacob, R.; Mollenkopf, H.-J.; Rajalingam, K.; Visekruna, A.; Steinhoff, U.: Selected commensals educate the intestinal vascular and immune system for immunocompetence. Microbiome 10 (1) (2022)

Thomson-Luque, R.; Votborg-Novél, L.; Osório, N. S.; Portugal, S.: Reply to: Relationship of circulating Plasmodium falciparum lifecycle stage to circulating parasitemia and total parasite biomass. Nature Communications 13 (1), 5558 (2022)

Liebler-Tenorio, E. M.; Heyl, J.; Wedlich, N.; Figl, J.; Köhler, H.; Krishnamoorthy, G.; Nieuwenhuizen, N. E.; Grode, L.; Kaufmann, S. H. E.; Menge, C.: Vaccine-Induced Subcutaneous Granulomas in Goats Reflect Differences in Host–Mycobacterium Interactions between BCG- and Recombinant BCG-Derivative Vaccines. International Journal of Molecular Sciences 23 (19), 10992 (2022)

DiNardo, A. R.; Gandhi, T.; Heyckendorf, J.; Grimm, S. L.; Rajapakshe, K.; Nishiguchi, T.; Reimann, M.; Kirchner, H. L.; Kahari, J.; Dlamini, Q. et al.; Lange, C.; Goldmann, T.; Marwitz, S.; group, D.-T. c. s.; Abhimanyu; Cirillo, J. D.; Kaufmann, S. H. E.; Netea, M. G.; van Crevel, R.; Mandalakas, A. M.; Coarfa, C.: Gene expression signatures identify biologically and clinically distinct tuberculosis endotypes. Eur Respir J 60 (3), 2102263 (2022)

Shaka, M.; Arias-Rojas, A.; Hrdina, A.; Frahm, D.; Iatsenko, I.: Lipopolysaccharide -mediated resistance to host antimicrobial peptides and hemocytederived reactive-oxygen species are the major Providencia alcalifaciens virulence factors in Drosophila melanogaster. PLoS Pathogens 18 (9), e1010825 (2022)

Sultana, S.; Crompton, M. E.; Meurer, K.; Jankiewicz, O.; Morales, G. H.; Johnson, C.; Horbach, E.; Hoffmann, K. P.; Kr, P.; Shah, R. et al.; Anderson, G. M.; Mortimer, N. T.; Schmitz, J. E.; Hadjifrangiskou, M.; Foti, A.; Dahl, J.-U.: Redox-Mediated Inactivation of the Transcriptional Repressor RcrR is Responsible for Uropathogenic Escherichia coli's Increased Resistance to Reactive Chlorine Species. mBio, e0192622 (2022)

Snyman, J.; Hwa, S. H.; Krause, R.; Muema, D.; Reddy, T.; Ganga, Y.; Karim, F.; Leslie, A.; Sigal, A.; Ndung'u, T. et al.; COMMIT-KZN Team: Similar Antibody Responses Against Severe Acute Respiratory Syndrome Coronavirus 2 in Individuals Living Without and With Human Immunodeficiency Virus on Antiretroviral Therapy During the First South African Infection Wave. Clinical Infectious Diseases 75 (1) (2022)