Publications

Singer, S. N.; Ndumnego, O. C.; Kim, R. S.; Ndung'u, T.; Anastos, K.; French, A.; Churchyard, G.; Paramithiothis, E.; Kasprowicz, V. O.; Achkar, J. M.: Plasma host protein biomarkers correlating with increasing Mycobacterium tuberculosis infection activity prior to tuberculosis diagnosis in people living with HIV. EBioMedicine 75, 103787 (2021)

Hrdina, A.; Iatsenko, I.: The roles of metals in insect–microbe interactions and immunity. Current Opinion in Insect Science 49, pp. 71 - 77 (2021)

Kreutzfeld, O.; Grützke, J.; Ingmundson, A.; Müller, K.; Matuschewski, K.: Absence of PEXEL-Dependent Protein Export in Plasmodium Liver Stages Cannot Be Restored by Gain of the HSP101 Protein Translocon ATPase. Frontiers in Genetics 12, 742153 (2021)

Domenech de Cellès, M.; Casalegno, J.-S.; Lina, B.; Opatowski, L.: Estimating the impact of influenza on the epidemiological dynamics of SARS-CoV-2. PeerJ 9, e12566 (2021)

Olivier, S.; Murray, T.; Matthews, P.; Mhlongo, N.; Gunda, R.; Baisley, K.; Gareta, D.; Modise, T.; Smit, T.; Herbst, K. et al.; Mpofana, X.; Ndung'u, T.; Koole, O.; Pillay, D.; Hanekom, W.; Wong, E.; Siedner, M. J.; team, V. S.: Pitfalls of Single Measurement Screening for Diabetes and Hypertension in Community-Based Settings. Glob Heart 16 (1) (2021)

Rodel, H. E.; Ferreira, I. A. T. M.; Ziegler, C. G. K.; Ganga, Y.; Bernstein, M.; Hwa, S.-H.; Nargan, K.; Lustig, G.; Kaplan, G.; Noursadeghi, M. et al.; Shalek, A. K.; Steyn, A. J. C.; Sigal, A.: Aggregated Mycobacterium tuberculosis Enhances the Inflammatory Response. Frontiers in Microbiology 12, 757134 (2021)

Millar, J. R.; Bengu, N.; Vieira, V. A.; Adland, E.; Roider, J.; Muenchhoff, M.; Fillis, R.; Sprenger, K.; Ntlantsana, V.; Fatti, I. et al.; Archary, M.; Groll, A.; Ismail, N.; García-Guerrero, M. C.; Matthews, P. C.; Ndung'u, T.; Puertas, M. C.; Martinez-Picado, J.; Goulder, P.: Early Initiation of Antiretroviral Therapy Following In Utero HIV Infection Is Associated With Low Viral Reservoirs but Other Factors Determine Viral Rebound. J Infect Dis 224 (11), pp. 1925 - 1934 (2021)

Gunda, R.; Koole, O.; Gareta, D.; Olivier, S.; Surujdeen, A.; Smit, T.; Modise, T.; Dreyer, J.; Ording-Jespersen, G.; Munatsi, D. et al.; Nxumalo, S.; Khoza, T.; Mhlongo, N.; Baisley, K.; Seeley, J.; Grant, A. D.; Herbst, K.; Ndung'u, T.; Hanekom, W. A.; Siedner, M. J.; Pillay, D.; Wong, E. B.; Vukuzazi Study Team: Cohort Profile: The Vukuzazi ('Wake Up and Know Yourself' in isiZulu) population science programme. International Journal of Epidemiology (2021)

Asowata, O. E.; Singh, A.; Ngoepe, A.; Herbert, N.; Fardoos, R.; Reddy, K.; Zungu, Y.; Nene, F.; Mthabela, N.; Ramjit, D. et al.; Karim, F.; Govender, K.; Ndung'u, T.; Porterfield, J. Z.; Adamson, J. H.; Madela, F. G.; Manzini, V. T.; Anderson, F.; Leslie, A.; Kløverpris, H. N.: Irreversible depletion of intestinal CD4+ T cells is associated with T cell activation during chronic HIV infection. JCI Insight. 6 (22), e146162 (2021)

Vieira, V. A.; Adland, E.; Malone, D. F. G.; Martin, M. P.; Groll, A.; Ansari, M. A.; Garcia-Guerrero, M. C.; Puertas, M. C.; Muenchhoff, M.; Guash, C. F. et al.; Brander, C.; Martinez-Picado, J.; Bamford, A.; Tudor-Williams, G.; Ndung'u, T.; Walker, B. D.; Ramsuran, V.; Frater, J.; Jooste, P.; Peppa, D.; Carrington, M.; Goulder, P. J. R.: An HLA-I signature favouring KIR-educated Natural Killer cells mediates immune control of HIV in children and contrasts with the HLA-B-restricted CD8+ T-cell-mediated immune control in adults. PLoS Pathogens 17 (11), e1010090 (2021)

Gurumurthy, R. K.; Kumar, N.; Chumduri, C.: Optimized protocol for isolation of high-quality single cells from the female mousereproductive tract tissues for single-cell RNAsequencing. STAR Protoc 2 (4), 100970 (2021)

Gurumurthy, R. K.; Kumar, N.; Chumduri, C.: Spatial analysis of organ-wide RNA, protein expression, and lineage tracing in the female mouse reproductive tract. STAR Protocols 2 (4), 100969 (2021)

Wang, C.; Nehls, C.; Baabe, D.; Burghaus, O.; Hurwitz, R.; Gutsmann, T.; Bröring, M.; Kolbe, M.: Flagellin lysine methyltransferase FliB catalyzes a [4Fe-4S] mediated methyl transfer reaction. PLoS Pathogens 17 (11), e1010052 (2021)

Kordes, M.; Ormond, L.; Rausch, S.; Matuschewski, K.; Hafalla, J. C. R.: TLR9 signalling inhibits Plasmodium liver infection by macrophage activation. Eur j Immunol (2021)

Cela, D.; Knackstedt, S. L.; Groves, S.; Rice, C. M.; Kwon, J. T. W.; Mordmüller, B.; Amulic, B.: PAD4 controls chemoattractant production and neutrophil trafficking in malaria. JLeukocBiol. (2021)

Berger, H.; Meyer, T. F.: Mechanistic dissection unmasks colibactin as a prevalent mutagenic driver of cancer. Cancer Cell 39 (11), pp. 1439 - 1441 (2021)

Kolloli, A.; Kumar, R.; Singh, P.; Narang, A.; Kaplan, G.; Sigal, A.; Subbian, S.: Aggregation state of Mycobacterium tuberculosis impacts host immunity and augments pulmonary disease pathology. Commun Biol. 4 (1) (2021)

Brandsma, A. M.; Hilmer, C.; Rauch, M.; Matuschewski, K.; Montagna, G. N.: Brandsma AM, Hilmer C, Rauch M, Matuschewski K, Montagna GN. Plasmodium early transcribed membrane proteins appear tailored to the host range of malaria parasites. Int J Parasitol S0020-7519 (21) (2021)

Zheng, X.; Marsman, G.; Lacey, K. A.; Chapman, J. R.; Goosmann, C.; Ueberheide, B. M.; Torres, V. J.: The cell envelope of Staphylococcus aureus selectively controls the sorting of virulence factors. Nature Communications 12 (1) (2021)

Kocher, A.; Papac, L.; Barquera, R.; Key, F. M.; Spyrou, M. A.; Hübler, R.; Rohrlach, A. B.; Aron, F.; Stahl, R.; Wissgott, A. et al.; van Bömmel, F.; Pfefferkorn, M.; Mittnik, A.; Villalba-Mouco, V.; Neumann, G. U.; Rivollat, M.; van de Loosdrecht, M. S.; Majander, K.; Tukhbatova, R. I.; Musralina, L.; Ghalichi, A.; Penske, S.; Sabin, S.; Michel, M.; Gretzinger, J.; Nelson, E. A.; Ferraz, T.; Nägele, K.; Parker, C.; Keller, M.; Guevara, E. K.; Feldman, M.; Eisenmann, S.; Skourtanioti, E.; Giffin, K.; Gnecchi-Ruscone, G. A.; Friederich, S.; Schimmenti, V.; Khartanovich, V.; Karapetian, M. K.; Chaplygin, M. S.; Kufterin, V. V.; Khokhlov, A. A.; Chizhevsky, A. A.; Stashenkov, D. A.; Kochkina, A. F.; Tejedor-Rodríguez, C.; de Lagrán, Í. G.-M.; Arcusa-Magallón, H.; Garrido-Pena, R.; Royo-Guillén, J. I.; Nováček, J.; Rottier, S.; Kacki, S.; Saintot, S.; Kaverzneva, E.; Belinskiy, A. B.; Velemínský, P.; Limburský, P.; Kostka, M.; Loe, L.; Popescu, E.; Clarke, R.; Lyons, A.; Mortimer, R.; Sajantila, A.; de Armas, Y. C.; Godoy, S. T. H.; Hernández-Zaragoza, D. I.; Pearson, J.; Binder, D.; Lefranc, P.; Kantorovich, A. R.; Maslov, V. E.; Lai, L.; Zoledziewska, M.; Beckett, J. F.; Langová, M.; Danielisová, A.; Ingman, T.; Atiénzar, G. G.; de Ibáñez, M. P. M.; Romero, A.; Sperduti, A.; Beckett, S.; Salter, S. J.; Zilivinskaya, E. D.; Vasil'ev, D. V.; von Heyking, K.; Burger, R. L.; Salazar, L. C.; Amkreutz, L.; Navruzbekov, M.; Rosenstock, E.; Alonso-Fernández, C.; Slavchev, V.; Kalmykov, A. A.; Atabiev, B. C.; Batieva, E.; Calmet, M. A.; Llamas, B.; Schultz, M.; Krauß, R.; Jiménez-Echevarría, J.; Francken, M.; Shnaider, S.; de Knijff, P.; Altena, E.; de Vijver, K. V.; Fehren-Schmitz, L.; Tung, T. A.; Lösch, S.; Dobrovolskaya, M.; Makarov, N.; Read, C.; Twest, M. V.; Sagona, C.; Ramsl, P. C.; Akar, M.; Yener, K. A.; Ballestero, E. C.; Cucca, F.; Mazzarello, V.; Utrilla, P.; Rademaker, K.; Fernández-Domínguez, E.; Baird, D.; Semal, P.; Márquez-Morfín, L.; Roksandic, M.; Steiner, H.; Salazar-García, D. C.; Shishlina, N.; Erdal, Y. S.; Hallgren, F.; Boyadzhiev, Y.; Boyadzhiev, K.; Küßner, M.; Sayer, D.; Onkamo, P.; Skeates, R.; Rojo-Guerra, M.; Buzhilova, A.; Khussainova, E.; Djansugurova, L. B.; Beisenov, A. Z.; Samashev, Z.; Massy, K.; Mannino, M.; Moiseyev, V.; Mannermaa, K.; Balanovsky, O.; Deguilloux, M.-F.; Reinhold, S.; Hansen, S.; Kitov, E. P.; Dobeš, M.; Ernée, M.; Meller, H.; Alt, K. W.; Prüfer, K.; Warinner, C.; Schiffels, S.; Stockhammer, P. W.; Bos, K.; Posth, C.; Herbig, A.; Haak, W.; Krause, J.; Kühnert, D.: Ten millennia of hepatitis B virus evolution. Science 374 (6564) (2021)