Publications of Ursula Zimny-Arndt

Journal Article (37)

2013
Journal Article
Thiede, B.; Koehler, C. J.; Strozynski, M.; Treumann, A.; Stein, R.; Zimny-Arndt, U.; Schmid, M.; Jungblut, P. R.: High resolution quantitative proteomics of HeLa cells protein species using stable isotope labeling with amino acids in cell culture(SILAC), two-dimensional gel electrophoresis(2DE) and nano-liquid chromatograpohy coupled to an LTQ-OrbitrapMass spectrometer. Molecular and Cellular Proteomics 12 (2), pp. 529 - 538 (2013)
2011
Journal Article
Holland, C.; Schmid, M.; Zimny-Arndt, U.; Rohloff, J.; Stein, R.; Jungblut, P. R.; Meyer, T. F.: Quantitative phosphoproteomics reveals link between Helicobacter pylori infection and RNA splicing modulation in host cells. Proteomics 11 (14), pp. 2798 - 2811 (2011)
Journal Article
Holland, C.; Schmid, M.; Zimny-Arndt, U.; Rohloff, J.; Stein, R.; Jungblut, P. R.; Meyer, T. F.: Quantitative phosphoproteomics reveals link between Helicobacter pylori infection and RNA splicing modulation in host cells. Proteomics 11 (14), pp. 2798 - 2811 (2011)
Journal Article
Schmidt, F.; Dahlmann, B.; Hustoft, H. K.; Koehler, C. J.; Strozynski, M.; Kloss, A.; Zimny-Arndt, U.; Jungblut, P. R.; Thiede, B.: Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. Amino Acids 41 (2), pp. 351 - 361 (2011)
2010
Journal Article
Holland, C.; Mak, T. N.; Zimny-Arndt, U.; Schmid, M.; Meyer, T. F.; Jungblut, P. R.; Brüggemann, H.: Proteomic identification of secreted proteins of Propionibacterium acnes. BMC Microbiology 10, 230 (2010)
Journal Article
Holland, C.; Mak, T. N.; Zimny-Arndt, U.; Schmid, M.; Meyer, T. F.; Jungblut, P. R.; Brüggemann, H.: Proteomic identification of secreted proteins of Propionibacterium acnes. BMC Microbiology 10, 230 (2010)
Journal Article
Jungblut, P. R.; Schiele, F.; Zimny-Arndt, U.; Ackermann, R.; Schmid, M.; Lange, S.; Stein, R.; Pleissner, K.-P.: Helicobacter pylori proteomics by 2-DE/MS, 1-DE-LC/MS and functional data mining. Proteomics 10 (2), pp. 182 - 193 (2010)
2008
Journal Article
Hoehenwarter, W.; Tang, Y.; Ackermann, R.; Pleissner, K.-P.; Schmid, M.; Stein, R.; Zimny-Arndt, U.; Kumar, N. M.; Jungblut, P. R.: Identification of proteins that modify cataract of mouse eye lens. PROTEOMICS 8 (23-24), pp. 5011 - 5024 (2008)
Journal Article
Paape, D.; Lippuner, C.; Schmid, M.; Ackermann, R.; Barrios-Llerena, M. E.; Zimny-Arndt, U.; Brinkmann, V.; Arndt, B.; Pleissner, K.-P.; Jungblut, P. R. et al.; Aebischer, T.: Transgenic, fluorescent Leishmania mexicana allow direct analysis of the Proteome of intracellular amastigotes. Molecular & Cellular Proteomics 7 (9), pp. 1688 - 1701 (2008)
2006
Journal Article
Hoehenwarter, W.; Ackermann, R.; Zimny-Arndt, U.; Kumar, N. M.; Jungblut, P. R.: The necessity of functional proteomics: protein species and molecular function elucidation exemplified by in vivo alpha A crystallin N-terminal truncation. Amino Acids 31 (3), pp. 317 - 323 (2006)
2005
Journal Article
Backert, S.; Gressmann, H.; Kwok, T.; Zimny-Arndt, U.; Konig, W.; Jungblut, P. R.; Meyer, T. F.: Gene expression and protein profiling of AGS gastric epithelial cells upon infection with Helicobacter pylori. PROTEOMICS 5 (15), pp. 3902 - 3918 (2005)
Journal Article
Sabarth, N.; Hurwitz, R.; Schmidt, M.; Zimny-Arndt, U.; Jungblut, P. R.; Meyer, T. F.; Bumann, D.: Identification of Helicobacter pylori surface proteins by selective proteinase K digestion and antibody phage display. Journal of Microbiological Methods 62 (3 Sp. Iss. Sp. Iss. SI), pp. 345 - 349 (2005)
Journal Article
Villarino, A.; Duran, R.; Wehenkel, A.; Fernandez, P.; England, P.; Brodin, P.; Cole, S. T.; Zimny-Arndt, U.; Jungblut, P. R.; Cervenansky, C. et al.; Alzari, P. M.: Proteomic identification of M. tuberculosis protein kinase substrates: PknB recruits GarA, a FHA domain-containing protein, through activation loop-mediated interactions. Journal of Molecular Biology 350 (5), pp. 953 - 963 (2005)
Journal Article
Hoehenwarter, W.; Kumar, N. M.; Wacker, M.; Zimny-Arndt, U.; Klose, J.; Jungblut, P. R.: Eye lens, proteomics: from global approach to detailed information about phakinin and gamma E and F crystallin genes. PROTEOMICS 5 (1), pp. 245 - 257 (2005)
2004
Journal Article
Rhomberg, T. A.; Karlberg, O.; Mini, T.; Zimny-Arndt, U.; Wickenberg, U.; Röttgen, M.; Jungblut, P. R.; Jeno, P.; Andersson, S. G. E.; Dehio, C.: Proteomic analysis of the sarcosine-insoluble outer membrane fraction of the bacterial pathogen Bartonella henselae. Proteomics 4 (10), pp. 3021 - 3033 (2004)
Journal Article
Krah, A.; Miehlke, S.; Pleissner, K.-P.; Zimny-Arndt, U.; Kirsch, C.; Lehn, N.; Meyer, T. F.; Jungblut, P. R.; Aebischer, T.: Identification of candidate antigens for serologic detection of Helicobacter pylori-infected patients with gastric carcinoma. International Journal of Cancer 108 (3), pp. 456 - 463 (2004)
2002
Journal Article
Bumann, D.; Holland, P.; Siejak, F.; Koesling, J.; Sabarth, N.; Lamer, S.; Zimny-Arndt, U.; Jungblut, P. R.; Meyer, T. F.: A comparison of murine and human immunoproteomes of Helicobacter pylori validates the preclinical murine infection model for antigen screening. Infection and Immunity 70 (11), pp. 6494 - 6498 (2002)
Journal Article
Sabarth, N.; Lamer, S.; Zimny-Arndt, U.; Jungblut, P. R.; Meyer, T. F.; Bumann, D.: Identification of surface proteins of Helicobacter pylori by selective biotinylation, affinity purification, and two- dimensional gel electrophoresis. Journal of Biological Chemistry 277 (31), pp. 27896 - 27902 (2002)
Journal Article
Bumann, D.; Aksu, S.; Wendland, M.; Janek, K.; Zimny-Arndt, U.; Sabarth, N.; Meyer, T. F.; Jungblut, P. R.: Proteome analysis of secreted proteins of the gastric pathogen Helicobacter pylori. Infection and Immunity 70 (7), pp. 3396 - 3403 (2002)
Journal Article
Kuckelkorn, U.; Ruppert, T.; Strehl, B.; Jungblut, P. R.; Zimny-Arndt, U.; Lamer, S.; Prinz, I.; Drung, I.; Kloetzel, P. M.; Kaufmann, S. H. E. et al.; Steinhoff, U.: Link between organ-specific antigen processing by 20S proteasomes and CD8(+) T cell-mediated autoimmunity. Journal of Experimental Medicine 195 (8), pp. 983 - 990 (2002)
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