Publications

Wong, A.; Kramer, S. C.; Weinberger, D. M.; Domenech de Cellès, M.: Assessing the effect of social contact structure on the impact of pneumococcal conjugate vaccines. Scientific Reports 15 (1), 35012 (2025)

Domenech de Cellès, M.; Wong, A.; Dalby, T.; Rohani, P.: Natural immune boosting biases pertussis infection estimates in seroprevalence studies. Nature Communications 16 (1), 8883 (2025)

Kramer, S. C.; Barrero Guevara, L. A.; der Heiden, M. A.; Wachtler, B.; Domenech de Cellès, M.: Changing socioeconomic inequalities in the incidence and case fatality rates of COVID-19 in Germany, March 2020 through May 2022: an ecological study. BMC Public Health 25 (1), 3289 (2025)

Fischer, C.; Frühauf, A.; Inchauste, L.; Cassiano, M. H. A.; Ramirez, H. A.; Barthélémy, K.; Machicado, L. B.; Bozza, F. A.; Brites, C.; Cabada, M. M. et al.; Sánchez, C. A. C.; Rodríguez, A. C.; de Lamballerie, X.; de Delgado, R. L. M. P.; de Oliveira-Filho, E. F.; Domenech de Cellès, M.; Franco-Muñoz, C.; Mendoza, M. P. G.; Nogueira, M. G.; Gélvez-Ramírez, R.-M.; Gonzalez, M. G.; Gotuzzo, E.; Kramer-Schadt, S.; Kuivanen, S.; Laiton-Donato, K.; Lozano-Parra, A.; Málaga-Trillo, E.; Alva, D. V. M.; Missé, D.; Moreira-Soto, A.; Souza, T. M.; Mozo, K.; Netto, E. M.; Olk, N.; Diaz, J. M. P.; Jorge, C. P.; Astudillo, A. M. P.; Piche-Ovares, M.; Priet, S.; Rincón-Orozco, B.; Romero-Zúñiga, J. J.; Cisneros, S. P. S.; Stöcker, A.; Ugalde, J. C. V.; Centeno, L. A. V.; Wenzler-Meya, M.; Zevallos, J. C.; Drexler, J. F.: The spatiotemporal ecology of Oropouche virus across Latin America: a multidisciplinary, laboratory-based, modelling study. The Lancet Infectious Diseases, S1473-3099(25)00110-0 (2025)

Barrero Guevara, L. A.; Kramer, S. C.; Kurth, T.; Domenech de Cellès, M.: Causal inference concepts can guide research into the effects of climate on infectious diseases. Nature Ecology & Evolution (2024)

Kramer, S. C.; Pirikahu, S.; Casalegno, J.-S.; Domenech de Cellès, M.: Characterizing the interactions between influenza and respiratory syncytial viruses and their implications for epidemic control. Nature Communications 15 (1), 10066 (2024)

Goult, E.; Barrero Guevara, L. A.; Briga, M.; Domenech de Cellès, M.: Estimating the optimal age for infant measles vaccination. Nature Communications 15, p. 1 (2024)

Domenech de Cellès, M.; Rohani, P.: Pertussis vaccines, epidemiology and evolution. Nature Reviews Microbiology (2024)

Briga, M.; Goult, E.; Brett, T. S.; Rohani, P.; Domenech de Cellès, M.: Maternal pertussis immunization and the blunting of routine vaccine effectiveness: a meta-analysis and modeling study. Nature Communications 15 (1), 921 (2024)

Wong, A.; Kramer, S. C.; Piccininni, M.; Rohmann, J. L.; Kurth, T.; Escolano, S.; Grittner, U.; Domenech de Cellès, M.: Using LASSO Regression to Estimate the Population-Level Impact of Pneumococcal Conjugate Vaccines. American Journal of Epidemiology 192 (7) (2023)

Barrero Guevara, L. A.; Goult, E.; Rodriguez, D.; Hernandez, L. J.; Kaufer, B.; Kurth, T.; Domenech de Cellès, M.: Delineating the seasonality of varicella and its association with climate in the tropical country of Colombia. Journal of Infectious Diseases, jiad244 (2023)

Wong, A.; Guevara, L. A. B.; Goult, E.; Briga, M.; Kramer, S. C.; Kovacevic, A.; Opatowski, L.; Domenech de Cellès, M.: The interactions of SARS-CoV-2 with cocirculating pathogens: Epidemiological implications and current knowledge gaps. PLoS Pathogens 19 (3), e1011167 (2023)

Domenech de Cellès, M.; Wong, A.; Barrero Guevara, L. A.; Rohani, P.: Immunological heterogeneity informs estimation of the durability of vaccine protection. Interface: Journal of the Royal Society 190, 20220070 (2022)

Kovacevic, A.; Eggo, R. M.; Baguelin, M.; Domenech de Cellès, M.; Opatowski, L.: The Impact of Cocirculating Pathogens on Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2)/Coronavirus Disease 2019 Surveillance: How Concurrent Epidemics May Introduce Bias and Decrease the Observed SARS-CoV-2 Percentage Positivity. The Journal of Infectious Diseases 225 (2), pp. 199 - 207 (2022)

Domenech de Cellès, M.; Goult, E.; Casalegno, J.-S.; Kramer, S. C.: The pitfalls of inferring virus-virus interactions from co-detection prevalence data: application to influenza and SARS-CoV-2. Proceedings of the Royal Society B: Biological Sciences 289 (1966), 20212358 (2022)

Domenech de Cellès, M.; Casalegno, J.-S.; Lina, B.; Opatowski, L.: Estimating the impact of influenza on the epidemiological dynamics of SARS-CoV-2. PeerJ 9, e12566 (2021)

Domenech de Cellès, M.; Campbell, H.; Borrow, R.; Taha, M.-K.; Opatowski, L.: Transmissibility and pathogenicity of the emerging meningococcal serogroup W sequence type-11 complex South American strain: a mathematical modeling study. BMC Medicine 18 (1), 109 (2020)

Abbara, S.; Domenech de Cellès, M.; Batista, R.; Mira, J.P.; Poyart, C.; Poupet, H.; Casetta, A.; Kernéis, S.: Variable impact of an antimicrobial stewardship programme in three intensive care units: time-series analysis of 2012-2017 surveillance data. Journal of Hospital Infection 104 (2), pp. 150 - 157 (2020)

Domenech de Cellès, M.; Rohani, P.; King, A. A.: Duration of Immunity and Effectiveness of Diphtheria-Tetanus–Acellular Pertussis Vaccines in Children. JAMA Pediatrics 173 (6), pp. 588 - 594 (2019)

Domenech de Cellès, M.; Arduin, H.; Lévy-Bruhl, D.; Georges, S.; Souty, C.; Guillemot, D.; Watier, L.; Opatowski, L.: Unraveling the seasonal epidemiology of pneumococcus. Proceedings of the National Academy of Sciences of the United States of America 116 (5), pp. 1802 - 1807 (2019)

Domenech de Cellès, M.; King, A.A.; Rohani, P.: Commentary: resolving pertussis resurgence and vaccine immunity using mathematical transmission models. Human Vaccines & Immunotherapeutics 15 (3), pp. 683 - 686 (2018)

Domenech de Cellès, M.; King, A. A.; Rohani, P.: Response to Comment on “The impact of past vaccination coverage and immunity on pertussis resurgence”. Science Translational Medicine 10 (472), eaau9627 (2018)

Domenech de Cellès, M.; Arduin, H.; Varon, E.; Souty, C.; Boëlle, P.-Y.; Lévy-Bruhl, D.; van der Werf, S.; Soulary, J.-C.; Guillemot, D.; Watier, L. et al.; Opatowski, L.: Characterizing and Comparing the Seasonality of Influenza-Like Illnesses and Invasive Pneumococcal Diseases Using Seasonal Waveforms. American Journal of Epidemiology 187 (5), pp. 1029 - 1039 (2018)

Domenech de Cellès, M.; Magpantay, F. M. G.; King, A. A.; Rohani, P.: The impact of past vaccination coverage and immunity on pertussis resurgence. Science Translational Medicine 10 (434), eaaj1748 (2018)

Rosello, A.; Pouwels, K. B.; Domenech de Cellès, M.; Kleef, E. V.; Hayward, A. C.; Hopkins, S.; Robotham, J. V.; Smieszek, T.; Opatowski, L.; Deeny, S. R.: Seasonality of urinary tract infections in the United Kingdom in different age groups: longitudinal analysis of The Health Improvement Network (THIN). Epidemiology & Infection 146 (1), pp. 37 - 45 (2018)

Arduin, H.; Domenech de Cellès, M.; Guillemot, D.; Watier, L.; Opatowski, L.: An agent-based model simulation of influenza interactions at the host level: insight into the influenza-related burden of pneumococcal infections. BMC Infectious Diseases 17 (1), 382 (2017)

Alari, A.; Chaussade, H.; Domenech de Cellès, M.; Le Fouler, L.; Varon, E.; Opatowski, L.; Guillemot, D.; Watier, L.: Impact of pneumococcal conjugate vaccines on pneumococcal meningitis cases in France between 2001 and 2014: a time series analysis. BMC Medicine 14 (1), 211 (2016)

Magpantay, F. M. G.; Domenech de Cellès, M.; Rohani, P.; King, A. A.: Pertussis immunity and epidemiology: mode and duration of vaccine-induced immunity. Parasitology 143 (7), pp. 835 - 849 (2016)

Domenech de Cellès, M.; Magpantay, F. M. G.; King, A. A.; Rohani, P.: The pertussis enigma: reconciling epidemiology, immunology and evolution. Proceedings of the Royal Society of London. Series B: Biological Sciences (London) 283 (1822), 20152309 (2016)

Domenech de Cellès, M.; Pons-Salort, M.; Varon, E.; Vibet, M.-A.; Ligier, C.; Letort, V.; Opatowski, L.; Guillemot, D.: Interaction of Vaccination and Reduction of Antibiotic Use Drives Unexpected Increase of Pneumococcal Meningitis. Scientific Reports 5, 11293 (2015)

King, A. A.; Domenech de Cellès, M.; Magpantay, F. M. G.; Rohani, P.: Avoidable errors in the modelling of outbreaks of emerging pathogens, with special reference to Ebola. Proceedings of the Royal Society of London. Series B: Biological Sciences (London) 282 (1806), 20150347 (2015)

Magpantay, F.M.G.; Riolo, M.A.; Domenech de Cellès, M.; King, A.A.; Rohani, P.: Epidemiological Consequences of Imperfect Vaccines for Immunizing Infections. SIAM Journal on Applied Mathematics 74 (6), pp. 1810 - 1830 (2014)

Domenech de Cellès, M.; Riolo, M. A.; Magpantay, F. M. G.; Rohani, P.; King, a. A. A.: Epidemiological evidence for herd immunity induced by acellular pertussis vaccines. Proceedings of the National Academy of Sciences of the United States of America 111 (7), pp. E716 - E717 (2014)

Opatowskia, L.; Domenech de Cellès, M.; Souissi, S.; Kardaś-Słoma, L.; Temime, L.; Guillemot, D.: Contribution des modèles mathématiques à la compréhension de la dynamique de diffusion des bactéries multi-résistantes à l’hôpital. Journal des Anti-infectieux 15 (4), pp. 193 - 203 (2013)

Domenech de Cellès, M.; Zahar, J.-R.; Abadie, V.; Guillemot, D.: Limits of patient isolation measures to control extended-spectrum beta-lactamase–producing Enterobacteriaceae: model-based analysis of clinical data in a pediatric ward. BMC Infectious Diseases 13, 187 (2013)

Domenech de Cellès, M.; Salomon, J.; Marinier, A.; Lawrence, C.; Gaillard, J.-L.; Herrmann, J.-L.; Guillemot, D.: Identifying More Epidemic Clones during a Hospital Outbreak of Multidrug-Resistant Acinetobacter baumannii. PLoS One 7 (9), e45758 (2012)

Domenech de Cellès, M.; Opatowski, L.; Salomon, J.; Varon, E.; Carbon, C.; Boëlle, P.-Y.; Guillemot, D.: Intrinsic Epidemicity of Streptococcus pneumoniae Depends on Strain Serotype and Antibiotic Susceptibility Pattern. Antimicrobial Agents and Chemotherapy 55 (11), pp. 5255 - 5261 (2011)