Publikationen von Cynthia M. Sharma

Zeitschriftenartikel (15)

2011
Zeitschriftenartikel
Sharma, C. M.; Papenfort, K.; Pernitzsch, S. R.; Mollenkopf, H.-J.; Hinton, J. C.D.; Vogel, J.: Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA. Molecular Microbiology 81 (5), S. 1144 - 1165 (2011)
2010
Zeitschriftenartikel
Papenfort, K.; Bouvier, M.; Mika, F.; Sharma, C. M.; Vogel, J.: Evidence for an autonomous 5 ' target recognition domain in an Hfq-associated small RNA. Proceedings of the National Academy of Sciences of the United States of America 107 (47), S. 20435 - 20440 (2010)
Zeitschriftenartikel
Bohn, C.; Rigoulay, C.; Chabelskaya, S.; Sharma, C. M.; Marchais, A.; Skorski, P.; Borezée-Durant, E.; Barbet, R.; Jacquet, E.; Jacq, A. et al.; Gautheret, D.; Felden, B.; Vogel, J.; Bouloc, P.: Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism. Nucleic Acids Research 38 (19), S. 6620 - 6636 (2010)
Zeitschriftenartikel
Irnov, I.; Sharma, C. M.; Vogel, J.; Winkler, W. C.: Identification of regulatory RNAs in Bacillus subtilis. Nucleic Acids Research 38 (19), S. 6637 - 6651 (2010)
Zeitschriftenartikel
Sharma, C. M.; Hoffmann, S.; Darfeuille, F.; Reignier, J.; Findeiß, S.; Sittka, A.; Chabas, S.; Reiche, K.; Hackermüller, J.; Reinhardt, R. et al.; Stadler, P. F.; Vogel, J.: The primary transcriptome of the major human pathogen Helicobacter pylori. Nature 464 (7286), S. 250 - 255 (2010)
Zeitschriftenartikel
Albrecht, M.; Sharma, C. M.; Reinhardt, R.; Vogel, J.; Rudel, T.: Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome. Nucleic Acids Research 38 (3), S. 868 - 877 (2010)
2009
Zeitschriftenartikel
Jäger, D.; Sharma, C. M.; Thomsen, J.; Ehlers, C.; Vogel, J.; Schmitz, R. A.: Deep sequencing analysis of the Methanosarcina mazei Go1 transcriptome in response to nitrogen availability. Proceedings of the National Academy of Sciences of the United States of America 106 (51), S. 21878 - 21882 (2009)
Zeitschriftenartikel
Berghoff, B. A.; Glaeser, J.; Sharma, C. M.; Vogel, J.; Klug, G.: Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides. Molecular Microbiology 74 (6), S. 1497 - 1512 (2009)
Zeitschriftenartikel
Sharma, C. M.; Vogel, J.: Experimental approaches for the discovery anal characterization of regulatory small RNA. Current Opinion in Microbiology 12 (5), S. 536 - 546 (2009)
Zeitschriftenartikel
Hoffmann, S.; Otto, C.; Kurtz, S.; Sharma, C. M.; Khaitovich, P.; Vogel, J.; Stadler, P. F.; Hackermüller, J.: Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures. PLoS Computational Biology 5 (9), e1000502 (2009)
Zeitschriftenartikel
Sittka, A.; Sharma, C. M.; Rolle, K.; Vogel, J.: Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes. RNA Biology 6 (3), S. 266 - 275 (2009)
2008
Zeitschriftenartikel
Bouvier, M.; Sharma, C. M.; Mika, F.; Nierhaus, K. H.; Vogel, J.: Small RNA Binding to 5′ mRNA Coding Region Inhibits Translational Initiation. Molecular Cell 32 (6), S. 827 - 837 (2008)
Zeitschriftenartikel
Sittka, A.; Lucchini, S.; Papenfort, K.; Sharma, C. M.; Rolle, K.; Binnewies, T. T.; Hinton, J. C. D.; Vogel, J.: Deep Sequencing Analysis of Small Noncoding RNA and mRNA Targets of the Global Post-Transcriptional Regulator, Hfq. PLoS Genetics 4 (8), e1000163 (2008)
2007
Zeitschriftenartikel
Sharma, C. M.; Darfeuille, F.; Plantinga, T. H.; Vogel, J.: A small RNA regulates multiple ABC transporter mRNAs by targeting C/A-rich elements inside and upstream of ribosome-binding sites. Genes & Development 21 (21), S. 2804 - 2817 (2007)
2005
Zeitschriftenartikel
Vogel, J.; Sharma, C. M.: How to find small non-coding RNAs in bacteria. Biological Chemistry 386 (12), S. 1219 - 1238 (2005)
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